STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381265_05469Unannotated protein. (476 aa)    
Predicted Functional Partners:
GCA_000381265_03694
Unannotated protein.
   
 0.943
GCA_000381265_03076
Unannotated protein.
  
 
 0.733
GCA_000381265_05546
Unannotated protein.
  
  
  0.717
GCA_000381265_03446
Unannotated protein.
    
  0.700
GCA_000381265_04066
Unannotated protein.
   
   0.697
GCA_000381265_04189
Unannotated protein.
   
 
  0.673
GCA_000381265_01689
Unannotated protein.
 
 0.619
GCA_000381265_02283
Unannotated protein.
 
 0.619
GCA_000381265_05483
Unannotated protein.
  
 0.592
GCA_000381265_05470
Unannotated protein.
       0.586
Your Current Organism:
Curvibacter lanceolatus
NCBI taxonomy Id: 1265504
Other names: C. lanceolatus ATCC 14669, Curvibacter lanceolatus ATCC 14669
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.