STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420085_00179Unannotated protein. (322 aa)    
Predicted Functional Partners:
GCA_000420085_01554
Unannotated protein.
  
 0.893
GCA_000420085_02495
Unannotated protein.
  
 0.872
GCA_000420085_01511
Unannotated protein.
  
  
 
0.679
GCA_000420085_02966
Unannotated protein.
  
 
 0.671
GCA_000420085_02980
Unannotated protein.
  
 
 0.656
GCA_000420085_00347
Unannotated protein.
  
 
 0.628
GCA_000420085_03608
Unannotated protein.
  
 
 0.628
GCA_000420085_05175
Unannotated protein.
  
 
 0.628
GCA_000420085_00184
Unannotated protein.
    
  0.613
GCA_000420085_00055
Unannotated protein.
  
 
 0.612
Your Current Organism:
Desulfospira joergensenii
NCBI taxonomy Id: 1265505
Other names: D. joergensenii DSM 10085, Desulfospira joergensenii DSM 10085
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.