STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420085_00550Unannotated protein. (444 aa)    
Predicted Functional Partners:
GCA_000420085_04499
Unannotated protein.
 
 
 0.975
GCA_000420085_01200
Unannotated protein.
 
 0.956
GCA_000420085_00945
Unannotated protein.
 
 
 0.944
GCA_000420085_00944
Unannotated protein.
  
 0.937
GCA_000420085_03802
Unannotated protein.
  
 
 0.904
GCA_000420085_05383
Unannotated protein.
   
 0.799
GCA_000420085_01202
Unannotated protein.
  
 0.766
GCA_000420085_00551
Unannotated protein.
       0.757
GCA_000420085_00125
Unannotated protein.
  
  
 
0.700
GCA_000420085_04307
Unannotated protein.
    
 0.690
Your Current Organism:
Desulfospira joergensenii
NCBI taxonomy Id: 1265505
Other names: D. joergensenii DSM 10085, Desulfospira joergensenii DSM 10085
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.