STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420085_03124Unannotated protein. (253 aa)    
Predicted Functional Partners:
GCA_000420085_03125
Unannotated protein.
       0.780
GCA_000420085_03126
Unannotated protein.
       0.780
GCA_000420085_02414
Unannotated protein.
  
     0.769
GCA_000420085_02777
Unannotated protein.
  
     0.766
GCA_000420085_02565
Unannotated protein.
  
     0.764
GCA_000420085_03127
Unannotated protein.
       0.567
GCA_000420085_03128
Unannotated protein.
       0.565
GCA_000420085_05122
Unannotated protein.
  
    0.548
GCA_000420085_03129
Unannotated protein.
 
     0.494
GCA_000420085_03805
Unannotated protein.
  
  
 0.491
Your Current Organism:
Desulfospira joergensenii
NCBI taxonomy Id: 1265505
Other names: D. joergensenii DSM 10085, Desulfospira joergensenii DSM 10085
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.