STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420085_03451Unannotated protein. (616 aa)    
Predicted Functional Partners:
GCA_000420085_03452
Unannotated protein.
 
 0.976
GCA_000420085_01190
Unannotated protein.
  
 0.948
GCA_000420085_02266
Unannotated protein.
  
 0.945
GCA_000420085_03567
Unannotated protein.
 
 0.924
GCA_000420085_00196
Unannotated protein.
  
 
 0.822
GCA_000420085_00352
Unannotated protein.
  
 0.812
GCA_000420085_02427
Unannotated protein.
  
0.812
GCA_000420085_03181
Unannotated protein.
  
 0.812
GCA_000420085_01492
Unannotated protein.
  
 0.767
GCA_000420085_01602
Unannotated protein.
  
 0.767
Your Current Organism:
Desulfospira joergensenii
NCBI taxonomy Id: 1265505
Other names: D. joergensenii DSM 10085, Desulfospira joergensenii DSM 10085
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.