STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420085_04062Unannotated protein. (149 aa)    
Predicted Functional Partners:
GCA_000420085_04063
Unannotated protein.
 
     0.813
GCA_000420085_04064
Unannotated protein.
       0.773
GCA_000420085_02266
Unannotated protein.
    
  0.763
GCA_000420085_04790
Unannotated protein.
    
 0.750
GCA_000420085_05020
Unannotated protein.
    
 0.725
GCA_000420085_04329
Unannotated protein.
    
  0.703
GCA_000420085_04065
Unannotated protein.
       0.701
GCA_000420085_04763
Unannotated protein.
 
  
 0.699
GCA_000420085_01232
Unannotated protein.
    
  0.698
GCA_000420085_04833
Unannotated protein.
    
  0.698
Your Current Organism:
Desulfospira joergensenii
NCBI taxonomy Id: 1265505
Other names: D. joergensenii DSM 10085, Desulfospira joergensenii DSM 10085
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.