STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378405_00621Unannotated protein. (126 aa)    
Predicted Functional Partners:
GCA_000378405_00642
Unannotated protein.
 
  
 0.885
GCA_000378405_02196
Unannotated protein.
 
  
 0.885
GCA_000378405_00626
Unannotated protein.
 
    0.864
GCA_000378405_02203
Unannotated protein.
 
    0.863
GCA_000378405_02194
Unannotated protein.
 
  
 0.800
GCA_000378405_00643
Unannotated protein.
 
  
 0.799
GCA_000378405_00623
Unannotated protein.
 
    0.769
GCA_000378405_02192
Unannotated protein.
 
     0.745
GCA_000378405_00620
Unannotated protein.
 
     0.744
GCA_000378405_00645
Unannotated protein.
 
     0.741
Your Current Organism:
Succinimonas amylolytica
NCBI taxonomy Id: 1265507
Other names: S. amylolytica DSM 2873, Succinimonas amylolytica DSM 2873
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.