STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubiEUbiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). (228 aa)    
Predicted Functional Partners:
EUJ19633.1
Heptaprenyl diphosphate synthase component II; COG0142 Geranylgeranyl pyrophosphate synthase; overlaps another CDS with the same product name.
 
 
 0.940
EUJ19634.1
Heptaprenyl diphosphate synthase component II; COG0142 Geranylgeranyl pyrophosphate synthase.
 
 
 0.928
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
 
  
 0.924
EUJ19632.1
Heptaprenyl diphosphate synthase component II; COG0142 Geranylgeranyl pyrophosphate synthase; overlaps another CDS with the same product name.
  
 
 0.879
ndk
Multifunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
 
   0.832
EUJ19636.1
Heptaprenyl diphosphate synthase component I.
  
  
 0.832
EUJ18412.1
Polyprenyl synthase, component II; COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 
 0.615
EUJ19629.1
COG0082 Chorismate synthase.
 
   
 0.570
EUJ19630.1
COG0082 Chorismate synthase.
     
 0.528
mtnN
Hypothetical protein; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
  
 0.500
Your Current Organism:
Listeria aquatica
NCBI taxonomy Id: 1265818
Other names: L. aquatica FSL S10-1188, Listeria aquatica FSL S10-1188
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.