STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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EUJ32228.1Putative CRP/FNR family transcriptional regulator; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. (232 aa)    
Predicted Functional Partners:
EUJ26905.1
COG0067 Glutamate synthase domain 1.
    
 0.854
EUJ29366.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 
 0.703
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.646
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.645
EUJ31460.1
Hypothetical protein.
    
 0.639
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
   0.631
EUJ28091.1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.544
EUJ28092.1
COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit; overlaps another CDS with the same product name.
    
 
 0.544
EUJ30203.1
Cyclic nucleotide-binding protein; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
  
  
0.535
EUJ24011.1
Internalin A; COG4886 Leucine-rich repeat (LRR) protein.
    
 0.525
Your Current Organism:
Listeria cornellensis
NCBI taxonomy Id: 1265820
Other names: L. cornellensis FSL F6-0969, Listeria cornellensis FSL F6-0969, Listeriaceae bacterium FSL F6-0969
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.