STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EUJ40424.1HTH-type transcriptional repressor CzrA; COG0640 Predicted transcriptional regulators. (101 aa)    
Predicted Functional Partners:
EUJ40425.1
ATPase P; COG2217 Cation transport ATPase.
 
  
 0.899
EUJ36907.1
Copper-transporting ATPase CopB; COG2217 Cation transport ATPase.
 
  
 0.579
EUJ35706.1
Copper-translocating P-type ATPase; COG2217 Cation transport ATPase.
 
  
 0.566
EUJ39694.1
COG0640 Predicted transcriptional regulators.
 
  
 0.564
EUJ40426.1
COG4292 Predicted membrane protein.
       0.480
EUJ40423.1
Hypothetical protein; COG1396 Predicted transcriptional regulators.
  
  
 0.476
EUJ35705.1
COG1937 Uncharacterized protein conserved in bacteria.
 
   
 0.469
Your Current Organism:
Listeria weihenstephanensis
NCBI taxonomy Id: 1265845
Other names: L. weihenstephanensis FSL R9-0317, Listeria weihenstephanensis DSM 24698, Listeria weihenstephanensis FSL R9-0317
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.