STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EUJ50959.1COG5416 Uncharacterized integral membrane protein. (72 aa)    
Predicted Functional Partners:
EUJ49398.1
Hypothetical protein.
  
     0.711
EUJ51166.1
Hypothetical protein.
  
     0.643
EUJ47919.1
Arsenate reductase; COG0394 Protein-tyrosine-phosphatase.
  
    0.591
EUJ51768.1
Hypothetical protein.
  
     0.505
EUJ43067.1
COG4844 Uncharacterized protein conserved in bacteria.
  
     0.489
EUJ42565.1
SPBc2 prophage-derived protein yorM; COG3584 Uncharacterized protein conserved in bacteria.
  
     0.475
EUJ47164.1
Hypothetical protein.
   
    0.465
EUJ43802.1
OsmC/Ohr family protein; COG1765 Predicted redox protein, regulator of disulfide bond formation.
  
     0.451
EUJ44976.1
UPF0478 protein; COG4768 Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain.
   
    0.450
EUJ47926.1
3'-5' exoribonuclease YhaM; COG3481 Predicted HD-superfamily hydrolase; overlaps another CDS with the same product name.
  
     0.423
Your Current Organism:
Listeria rocourtiae
NCBI taxonomy Id: 1265846
Other names: L. rocourtiae FSL F6-920, Listeria rocourtiae CIP 109804, Listeria rocourtiae FSL F6-920
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