Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EUJ38729.1 | EUJ40180.1 | BCAMP_08486 | BCAMP_05816 | NprE; Extracellular zinc metalloprotease. | Autolysin, amidase; COG5632 N-acetylmuramoyl-L-alanine amidase. | 0.502 |
EUJ40157.1 | EUJ40180.1 | BCAMP_05686 | BCAMP_05816 | YbtB protein; COG3428 Predicted membrane protein; overlaps another CDS with the same product name. | Autolysin, amidase; COG5632 N-acetylmuramoyl-L-alanine amidase. | 0.421 |
EUJ40179.1 | EUJ40180.1 | BCAMP_05811 | BCAMP_05816 | Putative autolysin (amidase). | Autolysin, amidase; COG5632 N-acetylmuramoyl-L-alanine amidase. | 0.776 |
EUJ40179.1 | EUJ40181.1 | BCAMP_05811 | BCAMP_05821 | Putative autolysin (amidase). | Hypothetical protein. | 0.547 |
EUJ40180.1 | EUJ38729.1 | BCAMP_05816 | BCAMP_08486 | Autolysin, amidase; COG5632 N-acetylmuramoyl-L-alanine amidase. | NprE; Extracellular zinc metalloprotease. | 0.502 |
EUJ40180.1 | EUJ40157.1 | BCAMP_05816 | BCAMP_05686 | Autolysin, amidase; COG5632 N-acetylmuramoyl-L-alanine amidase. | YbtB protein; COG3428 Predicted membrane protein; overlaps another CDS with the same product name. | 0.421 |
EUJ40180.1 | EUJ40179.1 | BCAMP_05816 | BCAMP_05811 | Autolysin, amidase; COG5632 N-acetylmuramoyl-L-alanine amidase. | Putative autolysin (amidase). | 0.776 |
EUJ40180.1 | EUJ40181.1 | BCAMP_05816 | BCAMP_05821 | Autolysin, amidase; COG5632 N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.547 |
EUJ40180.1 | EUJ40486.1 | BCAMP_05816 | BCAMP_05119 | Autolysin, amidase; COG5632 N-acetylmuramoyl-L-alanine amidase. | Two-component sensor histidine kinase YclK; COG0642 Signal transduction histidine kinase. | 0.420 |
EUJ40180.1 | EUJ41767.1 | BCAMP_05816 | BCAMP_02770 | Autolysin, amidase; COG5632 N-acetylmuramoyl-L-alanine amidase. | COG0584 Glycerophosphoryl diester phosphodiesterase. | 0.411 |
EUJ40181.1 | EUJ40179.1 | BCAMP_05821 | BCAMP_05811 | Hypothetical protein. | Putative autolysin (amidase). | 0.547 |
EUJ40181.1 | EUJ40180.1 | BCAMP_05821 | BCAMP_05816 | Hypothetical protein. | Autolysin, amidase; COG5632 N-acetylmuramoyl-L-alanine amidase. | 0.547 |
EUJ40486.1 | EUJ40180.1 | BCAMP_05119 | BCAMP_05816 | Two-component sensor histidine kinase YclK; COG0642 Signal transduction histidine kinase. | Autolysin, amidase; COG5632 N-acetylmuramoyl-L-alanine amidase. | 0.420 |
EUJ41767.1 | EUJ40180.1 | BCAMP_02770 | BCAMP_05816 | COG0584 Glycerophosphoryl diester phosphodiesterase. | Autolysin, amidase; COG5632 N-acetylmuramoyl-L-alanine amidase. | 0.411 |