Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CCQ89204.1 | CCQ90184.1 | NITGR_100009 | NITGR_250097 | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative ABC transporter, ATPase and permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.907 |
| CCQ89204.1 | CCQ90772.1 | NITGR_100009 | NITGR_380013 | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | ABC transporter, ATP-binding component, putative Lipoprotein-releasing system protein LolD; Function of strongly homologous gene; transporter. | 0.852 |
| CCQ89204.1 | CCQ91112.1 | NITGR_100009 | NITGR_580020 | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | ABC transporter, ATPase subunit. | 0.906 |
| CCQ89204.1 | acyP | NITGR_100009 | NITGR_100010 | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Acylphosphatase. | 0.773 |
| CCQ89204.1 | atpA | NITGR_100009 | NITGR_870008 | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | ATP synthase, F1 complex, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.924 |
| CCQ89204.1 | atpD | NITGR_100009 | NITGR_870006 | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | ATP synthase, F1 complex, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.937 |
| CCQ89204.1 | atpG | NITGR_100009 | NITGR_870007 | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | ATP synthase, F1 complex, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.830 |
| CCQ89204.1 | msbA | NITGR_100009 | NITGR_590056 | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Lipid A export ATP-binding/permease protein MsbA; Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.907 |
| CCQ89204.1 | msbA-2 | NITGR_100009 | NITGR_690001 | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Fragment of Lipid A export ATP-binding/permease protein MsbA (part 2); Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.929 |
| CCQ89204.1 | msbA-3 | NITGR_100009 | NITGR_980082 | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Lipid A export ATP-binding/permease protein MsbA; Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.909 |
| CCQ90184.1 | CCQ89204.1 | NITGR_250097 | NITGR_100009 | Putative ABC transporter, ATPase and permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.907 |
| CCQ90772.1 | CCQ89204.1 | NITGR_380013 | NITGR_100009 | ABC transporter, ATP-binding component, putative Lipoprotein-releasing system protein LolD; Function of strongly homologous gene; transporter. | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.852 |
| CCQ91112.1 | CCQ89204.1 | NITGR_580020 | NITGR_100009 | ABC transporter, ATPase subunit. | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.906 |
| acyP | CCQ89204.1 | NITGR_100010 | NITGR_100009 | Acylphosphatase. | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.773 |
| atpA | CCQ89204.1 | NITGR_870008 | NITGR_100009 | ATP synthase, F1 complex, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.924 |
| atpA | atpD | NITGR_870008 | NITGR_870006 | ATP synthase, F1 complex, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase, F1 complex, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
| atpA | atpG | NITGR_870008 | NITGR_870007 | ATP synthase, F1 complex, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase, F1 complex, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
| atpD | CCQ89204.1 | NITGR_870006 | NITGR_100009 | ATP synthase, F1 complex, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.937 |
| atpD | atpA | NITGR_870006 | NITGR_870008 | ATP synthase, F1 complex, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ATP synthase, F1 complex, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.999 |
| atpD | atpG | NITGR_870006 | NITGR_870007 | ATP synthase, F1 complex, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ATP synthase, F1 complex, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
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