STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ89720.1Membrane hypothetical protein; No homology to any previously reported sequences. (172 aa)    
Predicted Functional Partners:
CCQ89719.1
Membrane hypothetical protein; No homology to any previously reported sequences.
       0.792
CCQ89721.1
Similar to dolichyl-phosphate beta-D-mannosyltransferase.
       0.551
CCQ89718.1
Hypothetical protein; No homology to any previously reported sequences.
       0.509
CCQ89722.1
Sugar isomerase (SIS).
       0.478
CCQ89723.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.466
rfaEb
D-beta-D-heptose 1-phosphate adenosyltransferase; Function of strongly homologous gene; enzyme.
       0.455
CCQ89725.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.423
Your Current Organism:
Nitrospina gracilis
NCBI taxonomy Id: 1266370
Other names: N. gracilis 3/211, Nitrospina gracilis 3/211, Nitrospina gracilis str. 3/211, Nitrospina gracilis strain 3/211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.