STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ89908.1Hypothetical protein; No homology to any previously reported sequences. (401 aa)    
Predicted Functional Partners:
CCQ89648.1
Putative FOG: CheY-like receiver; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.900
NITGR_270008
Oligopeptide transporter, OPT superfamily (fragment).
 
 0.895
CCQ89173.1
Putative Diguanylate phosphodiesterase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 0.892
CCQ91240.1
Histidine kinase.
  
 
 0.878
CCQ90582.1
Putative Diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
  0.868
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
  
    0.866
CCQ90365.1
Hypothetical protein; No homology to any previously reported sequences.
  
  
  0.858
CCQ89922.1
Putative Signal transduction response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 0.857
CCQ89649.1
Putative Multi-sensor hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.842
CCQ89644.1
Putative PAS domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.839
Your Current Organism:
Nitrospina gracilis
NCBI taxonomy Id: 1266370
Other names: N. gracilis 3/211, Nitrospina gracilis 3/211, Nitrospina gracilis str. 3/211, Nitrospina gracilis strain 3/211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.