STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hypDHydrogenase maturation protein HypD; Function of strongly homologous gene; enzyme. (361 aa)    
Predicted Functional Partners:
hypE
Carbamoyl phosphate phosphatase, hydrogenase maturation protein HypE; Function of strongly homologous gene; enzyme.
 
 0.999
hypC
Hydrogenase assembly chaperone HypC; Function of strongly homologous gene; enzyme.
 
 
 0.999
hypF
Carbamoyltransferase, hydrogenase maturation protein HypF; Function of strongly homologous gene; enzyme.
 
  
 0.974
CCQ89955.1
Putative Hydrogenase maturation protease HycI; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.935
CCQ89954.1
Putative Hydrogenase nickel incorporation protein HypA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.865
hydA
Nickel-dependent hydrogenase, alpha subunit; Function of strongly homologous gene; enzyme.
 
   
 0.858
CCQ89957.1
Putative Nickel-dependent hydrogenase, delta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.808
CCQ89960.1
Putative Nickel-dependent hydrogenase, beta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.790
CCQ89958.1
Putative Nickel-dependent hydrogenase, gamma subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.789
CCQ89959.1
Cyclic nucleotide-binding protein, putative hydrogenase accessory protein; Function of strongly homologous gene; regulator.
  
    0.764
Your Current Organism:
Nitrospina gracilis
NCBI taxonomy Id: 1266370
Other names: N. gracilis 3/211, Nitrospina gracilis 3/211, Nitrospina gracilis str. 3/211, Nitrospina gracilis strain 3/211
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