STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ90184.1Putative ABC transporter, ATPase and permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (583 aa)    
Predicted Functional Partners:
CCQ89364.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
0.909
CCQ90429.1
AAA ATPase, central region.
    
 0.909
yrbF
ABC transporter, ATPase component, putative ATP-dependent toluene efflux transporter; Function of strongly homologous gene; enzyme.
    
0.909
ycf
Uncharacterized AAA domain-containing protein ycf46.
    
 0.909
CCQ89204.1
Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
0.907
NITGR_360097
ABC-type transport system, permease component (fragment).
   
0.899
CCQ89857.1
Uncharacterized ATPase, AAA family; Function of strongly homologous gene; enzyme; Belongs to the AAA ATPase family.
  
 
  0.893
CCQ90351.1
Putative Deacetylase, histone deacetylase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
  0.888
CCQ89801.1
Exported hypothetical protein; No homology to any previously reported sequences.
  
  
  0.876
CCQ90715.1
Hypothetical protein; No homology to any previously reported sequences.
   
  0.873
Your Current Organism:
Nitrospina gracilis
NCBI taxonomy Id: 1266370
Other names: N. gracilis 3/211, Nitrospina gracilis 3/211, Nitrospina gracilis str. 3/211, Nitrospina gracilis strain 3/211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.