STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NITGR_270035Putative Nuclease (fragment, part 2); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (198 aa)    
Predicted Functional Partners:
CCQ90255.1
Putative Cytochrome c oxidase, fused subunits I, II, and III (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.996
CCQ91477.1
Putative Octaheam cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
  
 0.987
CCQ91473.1
Putative Ubiquinol-cytochrome c reductase, Rieske 2Fe-2S iron sulfur subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
  0.731
CCQ91060.1
Putative Ubiquinol-cytochrome c reductase, cytochrome b subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
   
  0.673
CCQ91474.1
Putative Ubiquinol-cytochrome c reductase, cytochrome b6 subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
   
  0.673
CCQ90854.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
  0.630
CCQ90857.1
Hypothetical protein; No homology to any previously reported sequences.
   
  0.630
CCQ90859.1
Hypothetical protein; No homology to any previously reported sequences.
   
  0.630
CCQ90729.1
Hypothetical protein; No homology to any previously reported sequences.
   
  0.620
CCQ91475.1
Putative Ubiquinol-cytochrome c reductase, cytochrome b subunit PetD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
  0.579
Your Current Organism:
Nitrospina gracilis
NCBI taxonomy Id: 1266370
Other names: N. gracilis 3/211, Nitrospina gracilis 3/211, Nitrospina gracilis str. 3/211, Nitrospina gracilis strain 3/211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.