STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ90585.1Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. (280 aa)    
Predicted Functional Partners:
CCQ89553.1
Oxidoreductase.
  
 
 0.946
CCQ89755.1
Putative oxidoreductase, GFO/Idh/MocA family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.946
CCQ91874.1
Predicted ribokinase family sugar kinase.
  
 
 0.886
CCQ92115.1
Putative Fructokinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.886
aroD/aroE
Similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA); Belongs to the type-I 3-dehydroquinase family.
  
 
 0.775
fba
Similar to fructose-biphosphate aldolase.
 
  
 0.693
aldHT
Aldehyde dehydrogenase, thermostable.
  
 
 0.691
flhB-2
Fragment of Sensor histidine kinase (part 2); Function of strongly homologous gene; enzyme.
  
 
 0.691
CCQ90653.1
Homogentisate 1,2-dioxygenase.
  
  
 0.653
pheA
P-protein, bifunctional chorismate mutase/prephenate dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.622
Your Current Organism:
Nitrospina gracilis
NCBI taxonomy Id: 1266370
Other names: N. gracilis 3/211, Nitrospina gracilis 3/211, Nitrospina gracilis str. 3/211, Nitrospina gracilis strain 3/211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.