STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ90638.1Hypothetical protein; No homology to any previously reported sequences. (228 aa)    
Predicted Functional Partners:
yrbF
ABC transporter, ATPase component, putative ATP-dependent toluene efflux transporter; Function of strongly homologous gene; enzyme.
       0.471
yrbE
ABC transporter, membrane component, putative ATP-dependent toluene efflux transporter; Function of strongly homologous gene; transporter; Belongs to the MlaE permease family.
       0.471
CCQ90639.1
Putative ASPIC/UnbV domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.410
Your Current Organism:
Nitrospina gracilis
NCBI taxonomy Id: 1266370
Other names: N. gracilis 3/211, Nitrospina gracilis 3/211, Nitrospina gracilis str. 3/211, Nitrospina gracilis strain 3/211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.