STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ91666.1Putative C4-dicarboxylate transporter, large subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (424 aa)    
Predicted Functional Partners:
CCQ91665.1
Tripartite ATP-independent periplasmic transporter DctQ component.
 
 0.999
CCQ92051.1
Putative TRAP dicarboxylate transporter-DctP subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.900
CCQ92052.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.795
CCQ91669.1
Putative endoribonuclease L-PSP; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.769
ogt
Methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
       0.762
recO
Putative DNA repair protein recO; Involved in DNA repair and RecF pathway recombination.
       0.762
CCQ91670.1
Putative Diheme cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
       0.762
CCQ91430.1
AMP-dependent synthetase and ligase.
    
 0.644
CCQ92050.1
AMP-dependent synthetase and ligase.
  
  
 0.613
CCQ91664.1
Hypothetical protein; No homology to any previously reported sequences.
       0.572
Your Current Organism:
Nitrospina gracilis
NCBI taxonomy Id: 1266370
Other names: N. gracilis 3/211, Nitrospina gracilis 3/211, Nitrospina gracilis str. 3/211, Nitrospina gracilis strain 3/211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.