STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
porAPyruvate:ferredoxin oxidoreductase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (417 aa)    
Predicted Functional Partners:
porB
Pyruvate:ferredoxin oxidoreductase, beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.999
forB
2-oxoglutarate:ferredoxin oxidoredutase, beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.999
porE
Pyruvate:ferredoxin oxidoreductase, epsilon subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.985
porC
Pyruvate:ferredoxin oxidoreductase, gamma subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.982
forC
2-oxoglutarate:ferredoxin oxidoredutase, gamma subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.965
CCQ90450.1
Putative Indolepyruvate oxidoreductase subunit IorB (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.943
CCQ90451.1
Putative Indolepyruvate oxidoreductase subunit IorA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.943
forE
2-oxoglutarate:ferredoxin oxidoredutase, epsilon subunit; Function of strongly homologous gene; enzyme.
  
 0.857
CCQ90992.1
Hypothetical protein; No homology to any previously reported sequences.
  
 0.795
flgB
Flagellar basal-body rod protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
    
   0.770
Your Current Organism:
Nitrospina gracilis
NCBI taxonomy Id: 1266370
Other names: N. gracilis 3/211, Nitrospina gracilis 3/211, Nitrospina gracilis str. 3/211, Nitrospina gracilis strain 3/211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.