STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LADA_0A02080GLADA_0A02080g1_1; Belongs to the DEAD box helicase family. (478 aa)    
Predicted Functional Partners:
LADA_0E10220G
LADA_0E10220g1_1.
    
 
 0.990
LADA_0D06524G
LADA_0D06524g1_1.
    
 
 0.979
LADA_0C06348G
LADA_0C06348g1_1.
    
 
 0.709
LADA_0H06128G
LADA_0H06128g1_1.
    
 
 0.619
LADA_0H09230G
LADA_0H09230g1_1.
   
  
 0.560
LADA_0C08702G
LADA_0C08702g1_1; Belongs to the DEAD box helicase family.
  
0.536
LADA_0G02608G
LADA_0G02608g1_1; Belongs to the DEAD box helicase family.
  
0.533
LADA_0H19064G
LADA_0H19064g1_1.
    
 
 0.499
LADA_0C00980G
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
   
   0.455
LADA_0E08086G
LADA_0E08086g1_1.
   
 
 0.436
Your Current Organism:
Lachancea dasiensis
NCBI taxonomy Id: 1266660
Other names: L. dasiensis CBS 10888, Lachancea dasiensis CBS 10888
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.