STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGY81870.1Component of transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)    
Predicted Functional Partners:
AGY81871.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.982
AGY81872.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.953
AGY81873.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.948
AGY81874.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.931
AGY81869.1
Maltose phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.892
AGY81875.1
Neopullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
 
    0.759
AGY81868.1
Beta-phosphoglucomutase; Catalyzes the interconversion of beta-D-glucose 6-phosphate to beta-D-glucose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.752
AGY81867.1
Glucan 1,6-alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.588
AGY82130.1
Amylopullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.588
AGY81718.1
Maltose phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.543
Your Current Organism:
Carnobacterium inhibens
NCBI taxonomy Id: 1266845
Other names: ATCC BAA-2557, C. inhibens subsp. gilichinskyi, Carnobacterium gilichinskyi, Carnobacterium inhibens subsp. gilichinskyi, Carnobacterium inhibens subsp. gilichinskyi Nicholson et al. 2015, Carnobacterium sp. WN1359, DSM 27470, strain WN1359
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