STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGY82113.1CDP-glycerol:glycerophosphate glycerophosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (701 aa)    
Predicted Functional Partners:
AGY81408.1
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.775
AGY80933.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.714
AGY80987.1
Pre-neck appendage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.706
AGY81379.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.696
AGY81444.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.681
AGY81151.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.650
AGY81149.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.596
AGY81280.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.580
AGY81847.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.573
flgK
Flagellar hook protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.569
Your Current Organism:
Carnobacterium inhibens
NCBI taxonomy Id: 1266845
Other names: ATCC BAA-2557, C. inhibens subsp. gilichinskyi, Carnobacterium gilichinskyi, Carnobacterium inhibens subsp. gilichinskyi, Carnobacterium inhibens subsp. gilichinskyi Nicholson et al. 2015, Carnobacterium sp. WN1359, DSM 27470, strain WN1359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.