STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etfB_2Electron transfer flavoprotein small subunit. (259 aa)    
Predicted Functional Partners:
etfA_1
Electron transfer flavoprotein large subunit.
 0.999
etfA_2
Electron transfer flavoprotein large subunit.
 0.999
CUO17417.1
Acyl-CoA dehydrogenase%2C short-chain specific.
 
 
 0.999
CUO08629.1
Uncharacterized FAD-linked oxidoreductase Rv2280.
 
 
 0.917
echA8
Probable enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.885
porA
Pyruvate synthase subunit porA.
  
 
 0.869
paaH
Probable 3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.860
CUN50408.1
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA.
  
 
 0.838
thlA
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.824
CUN56121.1
NADH oxidase.
  
 
 0.772
Your Current Organism:
Clostridium ventriculi
NCBI taxonomy Id: 1267
Other names: ATCC 19633, ATCC 29068, BCRC 15563, C. ventriculi, CCRC 15563, CCRC:15563, DSM 286, NCTC 12966, Sarcina ventriculi, Zymosarcina ventriculi
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