STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383415_00553Unannotated protein. (248 aa)    
Predicted Functional Partners:
GCA_000383415_03939
Unannotated protein.
 
  
 0.972
GCA_000383415_02808
Unannotated protein.
 
  
 0.921
GCA_000383415_03938
Unannotated protein.
 
  
 0.921
GCA_000383415_01603
Unannotated protein.
 
   
 0.889
GCA_000383415_02262
Unannotated protein.
 
   
 0.856
GCA_000383415_02797
Unannotated protein.
 
   
 0.856
GCA_000383415_01153
Unannotated protein.
 
   
 0.853
GCA_000383415_02264
Unannotated protein.
 
   
 0.840
GCA_000383415_03482
Unannotated protein.
 
   
 0.727
GCA_000383415_02796
Unannotated protein.
 
     0.704
Your Current Organism:
Hyphomicrobium zavarzinii
NCBI taxonomy Id: 1267005
Other names: H. zavarzinii ATCC 27496, Hyphomicrobium zavarzinii ATCC 27496, Hyphomicrobium zavarzinii ZV-622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.