STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW32667.1UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (248 aa)    
Predicted Functional Partners:
SEW32673.1
Inhibitor of KinA.
 
 0.998
SEW32680.1
Antagonist of KipI.
 
 0.997
SEV86126.1
Delta-1-pyrroline-5-carboxylate dehydrogenase.
   
 
  0.902
SEW07658.1
L-proline dehydrogenase.
   
 
  0.727
ddl
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
    
  0.610
SEW32652.1
Hypothetical protein.
       0.572
SEW32659.1
Hypothetical protein.
       0.572
SEW19790.1
Citrate synthase; Belongs to the citrate synthase family.
   
    0.503
SEV89540.1
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.
   
    0.495
SEW32613.1
NRAMP (natural resistance-associated macrophage protein) metal ion transporters.
 
    0.485
Your Current Organism:
Fabibacter pacificus
NCBI taxonomy Id: 1267423
Other names: CGMCC 1.12402, F. pacificus, Fabibacter pacificus Huo et al. 2013, Fabibacter sp. DY53, JCM 18885, strain DY53
Server load: low (28%) [HD]