STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW33223.1Capsular exopolysaccharide family. (797 aa)    
Predicted Functional Partners:
SEW33228.1
Protein involved in gliding motility EpsA.
 
 0.998
SEV92861.1
Protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold.
  
 0.985
SEV96389.1
Protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold.
  
 0.985
SEV96787.1
Protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold.
  
 0.985
SEW31981.1
Uncharacterised nucleotidyltransferase.
  
 0.985
SEW33073.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.967
SEW22750.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.953
SEV97081.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
 
 0.950
SEW33046.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 
 0.930
SEV96430.1
Polysaccharide biosynthesis protein.
  
 
 0.872
Your Current Organism:
Fabibacter pacificus
NCBI taxonomy Id: 1267423
Other names: CGMCC 1.12402, F. pacificus, Fabibacter pacificus Huo et al. 2013, Fabibacter sp. DY53, JCM 18885, strain DY53
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.