STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381605_00151Unannotated protein. (714 aa)    
Predicted Functional Partners:
GCA_000381605_00149
Unannotated protein.
       0.605
GCA_000381605_00150
Unannotated protein.
       0.605
GCA_000381605_00152
Unannotated protein.
       0.578
GCA_000381605_03389
Unannotated protein.
  
     0.564
GCA_000381605_00148
Unannotated protein.
       0.546
GCA_000381605_02105
Unannotated protein.
  
 
  0.498
GCA_000381605_02399
Unannotated protein.
  
 
  0.497
GCA_000381605_01781
Unannotated protein.
  
 
  0.483
GCA_000381605_01368
Unannotated protein.
  
     0.445
GCA_000381605_03941
Unannotated protein.
  
 
  0.440
Your Current Organism:
Acidobacteriaceae bacterium KBS89
NCBI taxonomy Id: 1267534
Other names: A. bacterium KBS 89, Acidobacteriaceae bacterium KBS 89
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.