STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381605_03515Unannotated protein. (743 aa)    
Predicted Functional Partners:
GCA_000381605_03525
Unannotated protein.
 
 0.999
GCA_000381605_03276
Unannotated protein.
   
 
 0.968
GCA_000381605_00492
Unannotated protein.
  
 
 0.946
GCA_000381605_01515
Unannotated protein.
  
 
 0.899
GCA_000381605_00607
Unannotated protein.
 
  
 0.896
GCA_000381605_00604
Unannotated protein.
  
  
 0.891
GCA_000381605_00752
Unannotated protein.
   
 
 0.859
GCA_000381605_03273
Unannotated protein.
  
 
 0.855
GCA_000381605_02601
Unannotated protein.
  
  
 0.850
GCA_000381605_04424
Unannotated protein.
  
  
 0.850
Your Current Organism:
Acidobacteriaceae bacterium KBS89
NCBI taxonomy Id: 1267534
Other names: A. bacterium KBS 89, Acidobacteriaceae bacterium KBS 89
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.