STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fepCABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component. (274 aa)    
Predicted Functional Partners:
fepD
ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.993
fepD-2
ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.956
fepB
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 
 0.944
fepB-2
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
  
 
 0.845
btuB
Outer membrane cobalamin receptor translocator, tonb dependent.
 
   
 0.784
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
     
 0.656
btuR
cob(I)alamin adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
       0.650
CR3_3312
Amino acid adenylation domain protein.
  
  
 0.618
pbrT
High-affinity Fe2+/Pb2+ permease.
   
  
 0.606
cobC
Alpha-ribazole-5'-phosphate phosphatase.
     
 0.588
Your Current Organism:
Cupriavidus gilardii
NCBI taxonomy Id: 1267562
Other names: C. gilardii CR3, Cupriavidus gilardii CR3
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