Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
argG | wecD-2 | CR3_2253 | CR3_1280 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Histone acetyltransferase HPA2-related acetyltransferase. | 0.512 |
caiB-4 | wecD-2 | CR3_1281 | CR3_1280 | Putative acyl-CoA transferase/carnitine dehydratase; Belongs to the CoA-transferase III family. | Histone acetyltransferase HPA2-related acetyltransferase. | 0.572 |
nemR-2 | wecD-2 | CR3_1279 | CR3_1280 | TetR family transcriptional regulator. | Histone acetyltransferase HPA2-related acetyltransferase. | 0.487 |
wecD-2 | argG | CR3_1280 | CR3_2253 | Histone acetyltransferase HPA2-related acetyltransferase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.512 |
wecD-2 | caiB-4 | CR3_1280 | CR3_1281 | Histone acetyltransferase HPA2-related acetyltransferase. | Putative acyl-CoA transferase/carnitine dehydratase; Belongs to the CoA-transferase III family. | 0.572 |
wecD-2 | nemR-2 | CR3_1280 | CR3_1279 | Histone acetyltransferase HPA2-related acetyltransferase. | TetR family transcriptional regulator. | 0.487 |