STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR3_1444ABC transporter substrate-binding protein. (334 aa)    
Predicted Functional Partners:
CR3_2915
Hypothetical protein.
    0.816
CR3_3153
Hypothetical protein.
 
    0.816
CR3_0608
Hypothetical protein.
    0.814
CR3_3152
Hypothetical protein.
    0.814
CR3_0762
Tricarboxylate transporter.
    0.794
CR3_3778
Hypothetical protein.
    0.770
pspE-3
Rhodanese-like protein.
       0.689
CR3_2814
Hypothetical protein.
  
     0.679
metC
Cystathionine beta-lyase.
       0.471
CR3_1442
Putative metal-dependent enzyme of the double-stranded beta helix superfamily.
       0.423
Your Current Organism:
Cupriavidus gilardii
NCBI taxonomy Id: 1267562
Other names: C. gilardii CR3, Cupriavidus gilardii CR3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.