STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000599885_01000Unannotated protein. (714 aa)    
Predicted Functional Partners:
GCA_000599885_00939
Unannotated protein.
  
 
 0.961
GCA_000599885_00967
Unannotated protein.
    
 0.959
GCA_000599885_00624
Unannotated protein.
     
 0.951
GCA_000599885_01484
Unannotated protein.
   
 
 0.792
GCA_000599885_02405
Unannotated protein.
    
 0.625
GCA_000599885_02160
Unannotated protein.
   
 
 0.586
GCA_000599885_01001
Unannotated protein.
       0.516
GCA_000599885_00968
Unannotated protein.
     
 0.451
GCA_000599885_03661
Unannotated protein.
    
 0.414
GCA_000599885_01110
Unannotated protein.
   
  
 0.408
Your Current Organism:
Pantoea sp. IMH
NCBI taxonomy Id: 1267600
Other names: P. sp. IMH
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.