STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompR_2Transcriptional regulatory protein OmpR. (236 aa)    
Predicted Functional Partners:
envZ_2
Osmolarity sensor protein EnvZ.
 
 
 0.967
envZ_1
Osmolarity sensor protein EnvZ.
 
 
 0.859
baeS
Signal transduction histidine-protein kinase BaeS.
 
 
 0.851
phoR
Alkaline phosphatase synthesis sensor protein PhoR.
 
 
 0.848
pleC
Non-motile and phage-resistance protein.
 
 
 0.828
rstB
Sensor protein RstB.
 
 
 0.822
hssS
Heme sensor protein HssS.
 
 
 0.787
divK_2
Polar-differentiation response regulator DivK.
 
 
 0.755
WYH_02645
Chemotaxis protein CheY homolog.
 
 
 0.741
WYH_02670
Blue-light-activated protein.
 
 
 0.685
Your Current Organism:
Altererythrobacter atlanticus
NCBI taxonomy Id: 1267766
Other names: A. atlanticus, Altererythrobacter atlanticus Wu et al. 2014, Altererythrobacter sp. 26DY36, CGMCC 1.12411, JCM 18865, strain 26DY36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.