STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PVX_099300ATP-dependant RNA helicase, putative. (840 aa)    
Predicted Functional Partners:
PVX_123645
Pre-mRNA splicing factor PRP17, putative.
   
 0.999
PVX_124180
Negative elongation factor E, putative.
   
 0.999
PVX_080110
G10 protein, putative.
   
 0.999
PVX_119545
WD domain, G-beta repeat domain containing protein.
   
 0.999
PVX_111045
DNA binding protein Myb2, putative.
   
 0.999
PVX_091960
U6 snRNA-associated Sm-like protein LSm6, putative.
   
 0.992
PVX_117780
RNA binding protein, putative.
   
 0.991
PVX_094390
U5 small nuclear ribonuclear protein, putative.
   
 
 0.989
PVX_091165
Uncharacterized protein.
   
 
 0.987
PVX_096315
RRM domain-containing protein.
   
 
 0.984
Your Current Organism:
Plasmodium vivax
NCBI taxonomy Id: 126793
Other names: P. vivax Sal-1, Plasmodium vivax (STRAIN SAL-I), Plasmodium vivax (strain Salvador I), Plasmodium vivax SaI-1, Plasmodium vivax Sal-1, Plasmodium vivax Salvador I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.