STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PVX_097940Cell differentiation protein rcd1, putative. (596 aa)    
Predicted Functional Partners:
PVX_123205
CAF1 ribonuclease domain containing protein.
   
 0.999
PVX_092050
NOT2_3_5 domain-containing protein.
   
 0.999
PVX_094500
NOT2_3_5 domain-containing protein.
    
 0.999
PVX_100715
Uncharacterized protein.
    
 0.999
PVX_113270
ATP dependent RNA helicase, putative.
   
 
 0.978
PVX_085590
Uncharacterized protein.
    
 0.975
PVX_090875
Uncharacterized protein.
    
 0.975
PVX_118150
Uncharacterized protein.
    
 0.974
PVX_095275
Endonuclease/exonuclease/phosphatase domain containing protein.
    
 0.930
PVX_080270
Endo/exonuclease/phosphatase domain-containing protein.
    
 0.930
Your Current Organism:
Plasmodium vivax
NCBI taxonomy Id: 126793
Other names: P. vivax Sal-1, Plasmodium vivax (STRAIN SAL-I), Plasmodium vivax (strain Salvador I), Plasmodium vivax SaI-1, Plasmodium vivax Sal-1, Plasmodium vivax Salvador I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.