STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHV97949.1Dehydrogenase; COG0673 Predicted dehydrogenases and related proteins. (322 aa)    
Predicted Functional Partners:
AHV97950.1
PTS system D-fructose-specific IICB component (F1P-forming), Frc family; COG1445 Phosphotransferase system fructose-specific component IIB; TC 4.A.2.1.1.
       0.773
AHV95301.1
Gfo/Idh/MocA family oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
  
     0.715
AHV98281.1
Virulence factor mviM; COG0673 Predicted dehydrogenases and related proteins.
  
     0.560
AHV99452.1
Oxidoreductase domain-containing protein; COG0673 Predicted dehydrogenases and related proteins.
  
     0.535
AHV98314.1
COG0153 Galactokinase; Belongs to the GHMP kinase family.
 
 
 0.519
AHV96984.1
5-deoxy-glucuronate isomerase; COG3718 Uncharacterized enzyme involved in inositol metabolism.
  
  
 0.493
AHV97632.1
Hypothetical protein; COG0673 Predicted dehydrogenases and related proteins.
  
     0.470
AHV98703.1
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
 
    0.466
AHV95777.1
Glutamine--scyllo-inositol transaminase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.457
lysS
COG1190 Lysyl-tRNA synthetase (class II); Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.445
Your Current Organism:
Paenibacillus sabinae
NCBI taxonomy Id: 1268072
Other names: P. sabinae T27, Paenibacillus sabinae T27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.