STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHV98572.1COG4194 Predicted membrane protein. (465 aa)    
Predicted Functional Partners:
AHV98573.1
COG1725 Predicted transcriptional regulators.
 
   
 0.859
AHV95618.1
Hypothetical protein.
  
     0.674
AHV95617.1
Hypothetical protein.
  
     0.651
AHV97540.1
Hypothetical protein.
  
     0.642
AHV96968.1
Putative nucleoside kinase.
  
     0.581
AHV95609.1
COG3857 ATP-dependent nuclease, subunit B.
  
     0.571
AHV97968.1
Small-conductance mechanosensitive channel.
  
     0.528
AHV98571.1
COG2852 Uncharacterized protein conserved in bacteria.
  
    0.506
AHV99570.1
Hypothetical protein.
  
     0.479
AHV98574.1
Peptidoglycan-binding lysin; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
       0.467
Your Current Organism:
Paenibacillus sabinae
NCBI taxonomy Id: 1268072
Other names: P. sabinae T27, Paenibacillus sabinae T27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.