STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AVS7_00466ABC-type branched-chain amino acid transport systems, ATPase component; Gene_3; identified by MetaGeneAnnotator; putative. (251 aa)    
Predicted Functional Partners:
AVS7_00467
ABC-type branched-chain amino acid transport system, permease component; Gene_4; identified by MetaGeneAnnotator; putative; Belongs to the binding-protein-dependent transport system permease family.
 
  0.986
AVS7_00468
Branched-chain amino acid ABC-type transport system, permease component; Gene_5; identified by MetaGeneAnnotator; putative; Belongs to the binding-protein-dependent transport system permease family.
 
  0.924
AVS7_00307
Branched-chain amino acid ABC-type transport system, permease component; Gene_77; identified by MetaGeneAnnotator; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 0.922
AVS7_00465
ABC-type branched-chain amino acid transport systems, ATPase component; Gene_2; identified by MetaGeneAnnotator; putative.
 
 
 
0.907
AVS7_00469
ABC-type branched-chain amino acid transport systems, periplasmic component; Gene_6; identified by MetaGeneAnnotator; putative.
 
 
  0.881
AVS7_04228
ABC transporter permease; Gene_45; identified by MetaGeneAnnotator; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.813
AVS7_00930
Inner-membrane translocator; Gene_5; identified by MetaGeneAnnotator; putative; Belongs to the binding-protein-dependent transport system permease family.
 
  0.810
AVS7_00931
Inner-membrane translocator; Gene_6; identified by MetaGeneAnnotator; putative; Belongs to the binding-protein-dependent transport system permease family.
 
  0.808
AVS7_04229
ABC transporter permease; Gene_46; identified by MetaGeneAnnotator; putative; Belongs to the binding-protein-dependent transport system permease family.
 
  0.802
AVS7_01012
ABC transporter permease; Gene_87; identified by MetaGeneAnnotator; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.788
Your Current Organism:
Acidovorax sp. MRS7
NCBI taxonomy Id: 1268622
Other names: A. sp. MR-S7, Acidovorax sp. MR-S7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.