STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AVS7_01022Hypothetical protein; Gene_97; identified by MetaGeneAnnotator; putative. (335 aa)    
Predicted Functional Partners:
AVS7_03315
Cyanophycin synthetase; Gene_11; identified by MetaGeneAnnotator; putative.
    
 0.599
AVS7_03316
Cyanophycin synthetase; Gene_12; identified by MetaGeneAnnotator; putative.
    
 0.599
AVS7_03410
Small integral membrane protein; Gene_83; identified by MetaGeneAnnotator; putative.
   
    0.595
AVS7_01020
Predicted transcriptional regulator; Gene_95; identified by MetaGeneAnnotator; putative.
  
    0.586
AVS7_01021
Copper chaperone; Gene_96; identified by MetaGeneAnnotator; putative.
       0.586
ddl
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
    
 0.578
AVS7_01023
Cation transport ATPase; Gene_98; identified by MetaGeneAnnotator; putative.
       0.522
AVS7_02838
Small integral membrane protein; Gene_6; identified by MetaGeneAnnotator; putative.
   
    0.517
AVS7_03411
Hypothetical protein; Gene_84; identified by MetaGeneAnnotator; putative.
   
    0.476
AVS7_04189
CsbD family protein; Gene_6; identified by MetaGeneAnnotator; putative; Belongs to the UPF0337 (CsbD) family.
   
    0.476
Your Current Organism:
Acidovorax sp. MRS7
NCBI taxonomy Id: 1268622
Other names: A. sp. MR-S7, Acidovorax sp. MR-S7
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