STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AVS7_02161Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Gene_15; identified by MetaGeneAnnotator; putative; Belongs to the peptidase S1C family. (490 aa)    
Predicted Functional Partners:
AVS7_02163
Hypothetical protein; Gene_17; identified by MetaGeneAnnotator; putative.
  
 
 0.953
AVS7_00377
Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Gene_21; identified by MetaGeneAnnotator; putative; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
   
 
 0.944
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.876
AVS7_03485
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Gene_158; identified by MetaGeneAnnotator; putative; Belongs to the peptidase S1C family.
  
  
 
0.870
AVS7_02911
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Gene_79; identified by MetaGeneAnnotator; putative; Belongs to the peptidase S1C family.
  
  
 
0.824
AVS7_00060
Glycosyltransferases involved in cell wall biogenesis; Gene_60; identified by MetaGeneAnnotator; putative.
  
 0.800
AVS7_04715
Catalase; Gene_38; identified by MetaGeneAnnotator; putative.
   
 0.780
AVS7_02773
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family; Gene_39; identified by MetaGeneAnnotator; putative.
  
 
 0.770
AVS7_01880
FOG: Ankyrin repeat; Gene_78; identified by MetaGeneAnnotator; putative.
  
 0.769
AVS7_02725
Hypothetical protein; Gene_40; identified by MetaGeneAnnotator; putative.
  
 0.762
Your Current Organism:
Acidovorax sp. MRS7
NCBI taxonomy Id: 1268622
Other names: A. sp. MR-S7, Acidovorax sp. MR-S7
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