STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AVS7_03206Permeases of the major facilitator superfamily; Gene_18; identified by MetaGeneAnnotator; putative. (492 aa)    
Predicted Functional Partners:
AVS7_03207
Micrococcal nuclease (thermonuclease) homologs; Gene_19; identified by MetaGeneAnnotator; putative.
       0.600
AVS7_04078
Predicted exonuclease of the beta-lactamase fold involved in RNA processing; Gene_104; identified by MetaGeneAnnotator; putative.
   
    0.528
AVS7_01744
Chorismate mutase; Gene_56; identified by MetaGeneAnnotator; putative.
   
 
 0.443
AVS7_00750
Membrane-fusion protein; Gene_287; identified by MetaGeneAnnotator; putative.
   
  0.421
AVS7_00894
Secretion protein HlyD family protein; Gene_14; identified by MetaGeneAnnotator; putative.
   
  0.421
AVS7_01191
Multidrug resistance efflux pump; Gene_23; identified by MetaGeneAnnotator; putative.
   
  0.421
AVS7_03763
Secretion protein HlyD family protein; Gene_1; identified by MetaGeneAnnotator; putative.
   
  0.421
AVS7_03208
Predicted permeases; Gene_20; identified by MetaGeneAnnotator; putative.
       0.407
Your Current Organism:
Acidovorax sp. MRS7
NCBI taxonomy Id: 1268622
Other names: A. sp. MR-S7, Acidovorax sp. MR-S7
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