STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AVS7_03424Hypothetical protein; Gene_97; identified by MetaGeneAnnotator; putative. (323 aa)    
Predicted Functional Partners:
AVS7_01153
Hypothetical protein; Gene_54; identified by MetaGeneAnnotator; putative.
  
 
  0.801
AVS7_02581
Hypothetical protein; Gene_20; identified by MetaGeneAnnotator; putative.
  
 
  0.772
AVS7_03871
Hypothetical protein; Gene_1; identified by MetaGeneAnnotator; putative.
  
     0.748
rpoH
RNA polymerase sigma-32 subunit RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.
       0.583
AVS7_02580
Hypothetical protein; Gene_19; identified by MetaGeneAnnotator; putative.
  
 
  0.565
AVS7_01154
Hypothetical protein; Gene_55; identified by MetaGeneAnnotator; putative.
  
 
  0.549
AVS7_03960
Hypothetical protein; Gene_1; identified by MetaGeneAnnotator; putative.
  
     0.541
AVS7_03425
Hypothetical protein; Gene_98; identified by MetaGeneAnnotator; putative.
       0.532
AVS7_03422
Hypothetical protein; Gene_95; identified by MetaGeneAnnotator; putative.
       0.503
AVS7_03177
Regulatory protein MarR; Gene_7; identified by MetaGeneAnnotator; putative.
  
     0.482
Your Current Organism:
Acidovorax sp. MRS7
NCBI taxonomy Id: 1268622
Other names: A. sp. MR-S7, Acidovorax sp. MR-S7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.