STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Loa_01984Putative xylanase/chitin deacetylase. (272 aa)    
Predicted Functional Partners:
icmE
Dot/Icm secretion system protein ImcE.
  
     0.655
Loa_02156
Putative periplasmic protein.
  
     0.626
Loa_01985
Fe-S cluster protector protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.
       0.523
Loa_01983
Hypothetical protein.
       0.482
Loa_00349
Hypothetical protein.
  
     0.479
Loa_01738
Hypothetical protein.
  
     0.470
icmH
Dot/Icm secretion system protein ImcH.
  
     0.468
enhA1
Enhanced entry protein EnhA.
  
     0.462
Loa_00901
Ankyrin repeat protein.
  
     0.462
Loa_00090
Cysteine protease.
  
     0.455
Your Current Organism:
Legionella oakridgensis
NCBI taxonomy Id: 1268635
Other names: L. oakridgensis ATCC 33761 = DSM 21215, Legionella oakridgensis ATCC 33761, Legionella oakridgensis ATCC 33761 = DSM 21215, Legionella oakridgensis DSM 21215, Legionella oakridgensis DSM 21215 = ATCC 33761, Legionella oakridgensis OR-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.