STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Loa_02892Putative membrane protein. (174 aa)    
Predicted Functional Partners:
pagP
Antimicrobial peptide resistance and lipid A acylation protein PagP; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.
       0.560
Loa_01727
Putative hydrolases or acyltransferase.
  
     0.524
Loa_02890
Amino acid transporter.
       0.431
Your Current Organism:
Legionella oakridgensis
NCBI taxonomy Id: 1268635
Other names: L. oakridgensis ATCC 33761 = DSM 21215, Legionella oakridgensis ATCC 33761, Legionella oakridgensis ATCC 33761 = DSM 21215, Legionella oakridgensis DSM 21215, Legionella oakridgensis DSM 21215 = ATCC 33761, Legionella oakridgensis OR-10
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