STRINGSTRING
SMAR001379-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001379-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001379-PAannotation not available (4999 aa)    
Predicted Functional Partners:
SMAR005048-PA
annotation not available (1434 aa)
     
  0.956
SMAR012908-PA
annotation not available (1326 aa)
     
  0.923
SMAR010078-PA
Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate (574 aa)
     
 
  0.868
SMAR014933-PA
annotation not available (732 aa)
     
 
  0.850
SMAR009519-PA
annotation not available (1070 aa)
     
 
  0.796
SMAR013758-PA
Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate (299 aa)
     
 
  0.790
SMAR006940-PA
annotation not available (3773 aa)
     
0.787
SMAR003629-PA
annotation not available (1552 aa)
     
0.786
SMAR004004-PA
annotation not available (114 aa)
     
 
  0.785
SMAR004003-PA
annotation not available (114 aa)
     
 
  0.785
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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