STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1IJQ6_STRMMRNA helicase. (700 aa)    
Predicted Functional Partners:
T1JNR8_STRMM
Uncharacterized protein.
  
0.971
T1IID0_STRMM
Uncharacterized protein.
   
 0.970
T1IJG7_STRMM
Uncharacterized protein.
   
 0.962
T1J4B2_STRMM
Uncharacterized protein.
   
 
 0.955
T1IYB7_STRMM
Uncharacterized protein.
   
 0.948
T1IZM5_STRMM
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 0.944
T1JCX6_STRMM
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 0.943
T1J7X8_STRMM
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.942
T1JPG3_STRMM
WD_REPEATS_REGION domain-containing protein.
 
 
 
 0.935
T1J1K3_STRMM
PUM-HD domain-containing protein.
   
 
 0.933
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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