STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1ILR5_STRMMUncharacterized protein. (221 aa)    
Predicted Functional Partners:
T1IN01_STRMM
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.997
T1IPY6_STRMM
Uncharacterized protein.
   
 0.997
T1IQS0_STRMM
Sas10 domain-containing protein.
   
 0.997
T1IIB2_STRMM
WD_REPEATS_REGION domain-containing protein.
   
 0.996
T1JAJ7_STRMM
MI domain-containing protein.
   
 
 0.989
T1JID7_STRMM
Uncharacterized protein.
   
 
 0.988
T1JBL4_STRMM
RRM domain-containing protein.
   
 
 0.985
T1JFU9_STRMM
Uncharacterized protein.
   
 0.983
T1J7S2_STRMM
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
  0.968
T1IYL6_STRMM
RRM domain-containing protein.
   
 
 0.948
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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